No. words: 1157; after pruning: 1131


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.0 (1,1:496)  467  1.41 0.00 0.00  BE518003Sn25P067G04P108H051F1_087.ab1        1   497 (117)  C BE518003Sn25P067G04P108H051R1_087.ab1   (46)   497     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C BE518003Sn25P067G04P108H051R1_087.ab1   543 
   62    BE518003Sn25P067G04P108H051F1_087.ab1    16 
   66  C BE518003Sn25P067G04P108H051R1_087.ab1   478 
   86    BE518003Sn25P067G04P108H051F1_087.ab1    40 
   90  C BE518003Sn25P067G04P108H051R1_087.ab1   454 
   94    BE518003Sn25P067G04P108H051F1_087.ab1    48 
   98  C BE518003Sn25P067G04P108H051R1_087.ab1   446 
  134    BE518003Sn25P067G04P108H051F1_087.ab1    88 
  138  C BE518003Sn25P067G04P108H051R1_087.ab1   406 
  146    BE518003Sn25P067G04P108H051F1_087.ab1   100 
  158  C BE518003Sn25P067G04P108H051R1_087.ab1   386 
  162    BE518003Sn25P067G04P108H051F1_087.ab1   116 
Contig length: old 660, new 660

Contig length: old 660, new 660
New start: 0