No. words: 1464; after pruning: 1438


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 7.8 (1,1:579)  531  0.52 0.17 0.17  BE518446Ld04P026B09P026F111F1_030.ab1        1   574 (167)  C BE518446Ld04P026B09P026F111R1_030.ab1   (143)   580     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  270 nodes

 137 str. conn. components

Path
    1  C BE518446Ld04P026B09P026F111R1_030.ab1   723 
  157    BE518446Ld04P026B09P026F111F1_030.ab1    13 
  341  C BE518446Ld04P026B09P026F111R1_030.ab1   383 
  672    BE518446Ld04P026B09P026F111F1_030.ab1   528 
  676  C BE518446Ld04P026B09P026F111R1_030.ab1    48 
  680    BE518446Ld04P026B09P026F111F1_030.ab1   536 
  688  C BE518446Ld04P026B09P026F111R1_030.ab1    36 
  692    BE518446Ld04P026B09P026F111F1_030.ab1   548 
  696  C BE518446Ld04P026B09P026F111R1_030.ab1    28 
  700    BE518446Ld04P026B09P026F111F1_030.ab1   556 
Contig length: old 884, new 885

Contig length: old 885, new 885
New start: 0 
S Change at: 188; seg lengths: entry 1, contig 1