No. words: 1271; after pruning: 1245


Histogram of relative pair offsets, for read pairs with multiple alignments:
30     2
32     2
62     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.8 (1,1:1054)  199  1.40 0.47 0.00  BE591013Ld02P026F09P026B121F1_024.ab1      425   639 (0)  C BE591013Ld02P026F09P026B121R1_024.ab1   (0)   632   417 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  96 nodes

 50 str. conn. components

Path
    1    BE591013Ld02P026F09P026B121F1_024.ab1     1 
  476  C BE591013Ld02P026F09P026B121R1_024.ab1   581 
  484    BE591013Ld02P026F09P026B121F1_024.ab1   484 
  524  C BE591013Ld02P026F09P026B121R1_024.ab1   533 
  532    BE591013Ld02P026F09P026B121F1_024.ab1   532 
  556  C BE591013Ld02P026F09P026B121R1_024.ab1   501 
  560    BE591013Ld02P026F09P026B121F1_024.ab1   560 
  564  C BE591013Ld02P026F09P026B121R1_024.ab1   493 
Contig length: old 1055, new 1056

Contig length: old 1056, new 1056
New start: 0