No. words: 1284; after pruning: 1258


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 7.6 (1,1:479)  468  0.00 0.21 0.00  BE591099Ld10P103B06P103B121F1_020.ab1        4   480 (149)  C BE591099Ld10P103B06P103B121R1_020.ab1   (177)   478     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1  C BE591099Ld10P103B06P103B121R1_020.ab1   655 
  213    BE591099Ld10P103B06P103B121F1_020.ab1    38 
  217  C BE591099Ld10P103B06P103B121R1_020.ab1   439 
  305    BE591099Ld10P103B06P103B121F1_020.ab1   130 
  409  C BE591099Ld10P103B06P103B121R1_020.ab1   247 
  413    BE591099Ld10P103B06P103B121F1_020.ab1   238 
  473  C BE591099Ld10P103B06P103B121R1_020.ab1   183 
  481    BE591099Ld10P103B06P103B121F1_020.ab1   306 
Contig length: old 804, new 804

Contig length: old 804, new 804
New start: 0