No. words: 1366; after pruning: 1340


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 13.9 (1,1:644)  626  0.00 0.00 0.00  BE591222Td02P095G09P078E091F1_048.ab1        3   645 (48)  C BE591222Td02P095G09P078E091R1_048.ab1   (30)   643     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1  C BE591222Td02P095G09P078E091R1_048.ab1   673 
   70    BE591222Td02P095G09P078E091F1_048.ab1    42 
   74  C BE591222Td02P095G09P078E091R1_048.ab1   600 
  534    BE591222Td02P095G09P078E091F1_048.ab1   506 
  550  C BE591222Td02P095G09P078E091R1_048.ab1   124 
  574    BE591222Td02P095G09P078E091F1_048.ab1   546 
  594  C BE591222Td02P095G09P078E091R1_048.ab1    80 
  618    BE591222Td02P095G09P078E091F1_048.ab1   590 
  630  C BE591222Td02P095G09P078E091R1_048.ab1    44 
  634    BE591222Td02P095G09P078E091F1_048.ab1   606 
  650  C BE591222Td02P095G09P078E091R1_048.ab1    24 
  654    BE591222Td02P095G09P078E091F1_048.ab1   626 
Contig length: old 721, new 721

Contig length: old 721, new 721
New start: 0