No. words: 1323; after pruning: 1297


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.8 (1,1:615)  592  0.16 0.16 0.16  BE591222Td03P078E03P095B101F1_013.ab1        1   616 (45)  C BE591222Td03P078E03P095B101R1_013.ab1   (46)   616     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1  C BE591222Td03P078E03P095B101R1_013.ab1   662 
  179    BE591222Td03P078E03P095B101F1_013.ab1   133 
  419  C BE591222Td03P078E03P095B101R1_013.ab1   244 
  427    BE591222Td03P078E03P095B101F1_013.ab1   381 
  559  C BE591222Td03P078E03P095B101R1_013.ab1   104 
  563    BE591222Td03P078E03P095B101F1_013.ab1   517 
  607  C BE591222Td03P078E03P095B101R1_013.ab1    56 
  611    BE591222Td03P078E03P095B101F1_013.ab1   565 
  643  C BE591222Td03P078E03P095B101R1_013.ab1    20 
  647    BE591222Td03P078E03P095B101F1_013.ab1   601 
Contig length: old 707, new 707

Contig length: old 707, new 707
New start: 0