No. words: 1363; after pruning: 1337


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.3 (1,1:641)  625  0.00 0.00 0.00  BE591222Td10P095G09P078E091F1_040.ab1        1   642 (39)  C BE591222Td10P095G09P078E091R1_040.ab1   (40)   642     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  322 nodes

 163 str. conn. components

Path
    1  C BE591222Td10P095G09P078E091R1_040.ab1   682 
   68    BE591222Td10P095G09P078E091F1_040.ab1    28 
   80  C BE591222Td10P095G09P078E091R1_040.ab1   603 
  396    BE591222Td10P095G09P078E091F1_040.ab1   356 
  416  C BE591222Td10P095G09P078E091R1_040.ab1   267 
  428    BE591222Td10P095G09P078E091F1_040.ab1   388 
  440  C BE591222Td10P095G09P078E091R1_040.ab1   243 
  488    BE591222Td10P095G09P078E091F1_040.ab1   448 
  564  C BE591222Td10P095G09P078E091R1_040.ab1   119 
  580    BE591222Td10P095G09P078E091F1_040.ab1   540 
  628  C BE591222Td10P095G09P078E091R1_040.ab1    55 
  644    BE591222Td10P095G09P078E091F1_040.ab1   604 
  652  C BE591222Td10P095G09P078E091R1_040.ab1    31 
  656    BE591222Td10P095G09P078E091F1_040.ab1   616 
Contig length: old 721, new 721

Contig length: old 721, new 721
New start: 0