No. words: 1493; after pruning: 1453


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.5 (1,1:1307)  160  2.16 0.00 0.54  BE591804As01P026C10P026G121F1_051.ab1      390   574 (0)  C BE591804As01P026C10P026G121R1_051.ab1   (0)   919   736 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  82 nodes

 43 str. conn. components

Path
    1    BE591804As01P026C10P026G121F1_051.ab1     1 
  433  C BE591804As01P026C10P026G121R1_051.ab1   876 
  444    BE591804As01P026C10P026G121F1_051.ab1   444 
  504  C BE591804As01P026C10P026G121R1_051.ab1   805 
  508    BE591804As01P026C10P026G121F1_051.ab1   508 
  520  C BE591804As01P026C10P026G121R1_051.ab1   789 
Contig length: old 1308, new 1308

Contig length: old 1308, new 1309
New start: 0 
I Change at: 566; seg lengths: entry 3, contig 2