No. words: 1532; after pruning: 1506


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.8 (1,1:1263)  237  2.99 0.00 0.00  BE591804At01P026C10P026G121F1_064.ab1      409   676 (0)  C BE591804At01P026C10P026G121R1_064.ab1   (0)   856   589 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  112 nodes

 58 str. conn. components

Path
    1    BE591804At01P026C10P026G121F1_064.ab1     1 
  538  C BE591804At01P026C10P026G121R1_064.ab1   727 
  542    BE591804At01P026C10P026G121F1_064.ab1   542 
  562  C BE591804At01P026C10P026G121R1_064.ab1   703 
  585    BE591804At01P026C10P026G121F1_064.ab1   585 
  589  C BE591804At01P026C10P026G121R1_064.ab1   676 
Contig length: old 1264, new 1264

Contig length: old 1264, new 1264
New start: 0