No. words: 1416; after pruning: 1390


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -2.1 -2.1 (1,1:1292)   93  0.00 4.13 0.83  BE591804Ld06P026C10P026G121F1_051.ab1      611   731 (0)  C BE591804Ld06P026C10P026G121R1_051.ab1   (0)   685   561 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-2.1       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  42 nodes

 23 str. conn. components

Path
    1    BE591804Ld06P026C10P026G121F1_051.ab1     1 
  622  C BE591804Ld06P026C10P026G121R1_051.ab1   674 
  640    BE591804Ld06P026C10P026G121F1_051.ab1   640 
  652  C BE591804Ld06P026C10P026G121R1_051.ab1   644 
  672    BE591804Ld06P026C10P026G121F1_051.ab1   672 
  676  C BE591804Ld06P026C10P026G121R1_051.ab1   620 
  690    BE591804Ld06P026C10P026G121F1_051.ab1   689 
  694  C BE591804Ld06P026C10P026G121R1_051.ab1   602 
Contig length: old 1293, new 1295

Contig length: old 1295, new 1296
New start: 0 
I Change at: 630; seg lengths: entry 1, contig 0