No. words: 1717; after pruning: 1677


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.4 (1,1:1291)  381  1.88 0.00 0.47  BE591804Tu02P026C10P026G121F1_053.ab1      408   832 (0)  C BE591804Tu02P026C10P026G121R1_053.ab1   (0)   885   463 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1    BE591804Tu02P026C10P026G121F1_053.ab1     1 
  435  C BE591804Tu02P026C10P026G121R1_053.ab1   858 
  446    BE591804Tu02P026C10P026G121F1_053.ab1   446 
  506  C BE591804Tu02P026C10P026G121R1_053.ab1   787 
  510    BE591804Tu02P026C10P026G121F1_053.ab1   510 
  571  C BE591804Tu02P026C10P026G121R1_053.ab1   722 
  579    BE591804Tu02P026C10P026G121F1_053.ab1   579 
  583  C BE591804Tu02P026C10P026G121R1_053.ab1   710 
Contig length: old 1292, new 1292

Contig length: old 1292, new 1292
New start: 0