No. words: 1013; after pruning: 987


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.7 (1,1:613)  233  0.42 0.00 0.00  BE604885Ld01P129F05P129F111F1_059.ab1        1   239 (0)  C BE604885Ld01P129F05P129F111R1_059.ab1   (160)   614   376 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  118 nodes

 61 str. conn. components

Path
    1  C BE604885Ld01P129F05P129F111R1_059.ab1   774 
  164    BE604885Ld01P129F05P129F111F1_059.ab1     4 
  386  C BE604885Ld01P129F05P129F111R1_059.ab1   389 
Contig length: old 774, new 774

Contig length: old 774, new 774
New start: 0