No. words: 1224; after pruning: 1198


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 10.5 (1,1:570)  548  0.00 0.18 0.00  BE604959Sn31P137H05P078G091F1_014.ab1        7   571 (47)  C BE604959Sn31P137H05P078G091R1_014.ab1   (40)   566     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C BE604959Sn31P137H05P078G091R1_014.ab1   606 
  169    BE604959Sn31P137H05P078G091F1_014.ab1   134 
  173  C BE604959Sn31P137H05P078G091R1_014.ab1   434 
  257    BE604959Sn31P137H05P078G091F1_014.ab1   222 
  321  C BE604959Sn31P137H05P078G091R1_014.ab1   286 
  329    BE604959Sn31P137H05P078G091F1_014.ab1   294 
  461  C BE604959Sn31P137H05P078G091R1_014.ab1   146 
  465    BE604959Sn31P137H05P078G091F1_014.ab1   430 
  569  C BE604959Sn31P137H05P078G091R1_014.ab1    38 
  577    BE604959Sn31P137H05P078G091F1_014.ab1   542 
Contig length: old 653, new 653

Contig length: old 653, new 653
New start: 0