No. words: 1224; after pruning: 1198


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 10.7 (1,1:579)  555  0.00 0.00 0.00  BE604959Ta20P137H05P078G091F1_088.ab1        7   575 (35)  C BE604959Ta20P137H05P078G091R1_088.ab1   (40)   574     6 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  286 nodes

 145 str. conn. components

Path
    1  C BE604959Ta20P137H05P078G091R1_088.ab1   614 
  132    BE604959Ta20P137H05P078G091F1_088.ab1    98 
  140  C BE604959Ta20P137H05P078G091R1_088.ab1   475 
  416    BE604959Ta20P137H05P078G091F1_088.ab1   382 
  428  C BE604959Ta20P137H05P078G091R1_088.ab1   187 
  512    BE604959Ta20P137H05P078G091F1_088.ab1   478 
  528  C BE604959Ta20P137H05P078G091R1_088.ab1    87 
  536    BE604959Ta20P137H05P078G091F1_088.ab1   502 
  544  C BE604959Ta20P137H05P078G091R1_088.ab1    71 
  552    BE604959Ta20P137H05P078G091F1_088.ab1   518 
  560  C BE604959Ta20P137H05P078G091R1_088.ab1    55 
  576    BE604959Ta20P137H05P078G091F1_088.ab1   542 
Contig length: old 644, new 644

Contig length: old 644, new 644
New start: 0