No. words: 1382; after pruning: 1356


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.3 (1,1:563)  552  0.00 0.18 0.00  BE636979Ln04P003F05F111F1_12.ab1        1   564 (114)  C BE636979Ln04P003F05F111R1_12.ab1   (139)   565     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1  C BE636979Ln04P003F05F111R1_12.ab1   704 
  162    BE636979Ln04P003F05F111F1_12.ab1    22 
  554  C BE636979Ln04P003F05F111R1_12.ab1   151 
  698    BE636979Ln04P003F05F111F1_12.ab1   558 
Contig length: old 818, new 818

Contig length: old 818, new 818
New start: 0