No. words: 1107; after pruning: 1081


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:391)  383  0.00 0.00 0.00  BE636993Ld07P027B01P027B071F1_031.ab1        1   392 (173)  C BE636993Ld07P027B01P027B071R1_031.ab1   (150)   392     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  198 nodes

 101 str. conn. components

Path
    1  C BE636993Ld07P027B01P027B071R1_031.ab1   542 
  194    BE636993Ld07P027B01P027B071F1_031.ab1    44 
  198  C BE636993Ld07P027B01P027B071R1_031.ab1   345 
  202    BE636993Ld07P027B01P027B071F1_031.ab1    52 
  206  C BE636993Ld07P027B01P027B071R1_031.ab1   337 
  218    BE636993Ld07P027B01P027B071F1_031.ab1    68 
  222  C BE636993Ld07P027B01P027B071R1_031.ab1   321 
  442    BE636993Ld07P027B01P027B071F1_031.ab1   292 
  454  C BE636993Ld07P027B01P027B071R1_031.ab1    89 
  466    BE636993Ld07P027B01P027B071F1_031.ab1   316 
  470  C BE636993Ld07P027B01P027B071R1_031.ab1    73 
  474    BE636993Ld07P027B01P027B071F1_031.ab1   324 
  494  C BE636993Ld07P027B01P027B071R1_031.ab1    49 
  502    BE636993Ld07P027B01P027B071F1_031.ab1   352 
Contig length: old 715, new 715

Contig length: old 715, new 715
New start: 0