No. words: 1019; after pruning: 980


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.1 (1,1:634)  105  0.93 0.00 0.00  BF145392Ld09P078E04P078E101F1_017.ab1      635   742 (66)    BF145392Ld09P078E04P078E101F1_009.ab1        1   108 (0) *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    1    1
    2    1

Chimera merges: 


Contig 1:  54 nodes

 29 str. conn. components

Path
    1    BF145392Ld09P078E04P078E101F1_017.ab1     1 
  679    BF145392Ld09P078E04P078E101F1_009.ab1    45 
  695    BF145392Ld09P078E04P078E101F1_017.ab1   695 
  703    BF145392Ld09P078E04P078E101F1_009.ab1    69 
  707    BF145392Ld09P078E04P078E101F1_017.ab1   707 
  719    BF145392Ld09P078E04P078E101F1_009.ab1    85 
  723    BF145392Ld09P078E04P078E101F1_017.ab1   723 
  735    BF145392Ld09P078E04P078E101F1_009.ab1   101 
  739    BF145392Ld09P078E04P078E101F1_017.ab1   739 
Contig length: old 808, new 808

Contig length: old 808, new 808
New start: 0