No. words: 1464; after pruning: 1438


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.3 (1,1:893)  552  0.70 0.00 0.00  BF200549Ld02P027G01P027G071F1_069.ab1       67   636 (0)  C BF200549Ld02P027G01P027G071R1_069.ab1   (0)   828   259 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  276 nodes

 140 str. conn. components

Path
    1    BF200549Ld02P027G01P027G071F1_069.ab1     1 
  246  C BF200549Ld02P027G01P027G071R1_069.ab1   649 
  262    BF200549Ld02P027G01P027G071F1_069.ab1   262 
  270  C BF200549Ld02P027G01P027G071R1_069.ab1   625 
  278    BF200549Ld02P027G01P027G071F1_069.ab1   278 
  286  C BF200549Ld02P027G01P027G071R1_069.ab1   609 
  290    BF200549Ld02P027G01P027G071F1_069.ab1   290 
  298  C BF200549Ld02P027G01P027G071R1_069.ab1   597 
  330    BF200549Ld02P027G01P027G071F1_069.ab1   330 
  334  C BF200549Ld02P027G01P027G071R1_069.ab1   561 
  354    BF200549Ld02P027G01P027G071F1_069.ab1   354 
  358  C BF200549Ld02P027G01P027G071R1_069.ab1   537 
Contig length: old 894, new 894

Contig length: old 894, new 894
New start: 0 
S Change at: 589; seg lengths: entry 1, contig 1