No. words: 980; after pruning: 954


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:443)  437  0.00 0.00 0.00  BF200549Ta11P059G05P027G071F1_076.ab1        1   444 (46)  C BF200549Ta11P059G05P027G071R1_076.ab1   (46)   444     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1  C BF200549Ta11P059G05P027G071R1_076.ab1   490 
   82    BF200549Ta11P059G05P027G071F1_076.ab1    36 
   90  C BF200549Ta11P059G05P027G071R1_076.ab1   401 
   94    BF200549Ta11P059G05P027G071F1_076.ab1    48 
  110  C BF200549Ta11P059G05P027G071R1_076.ab1   381 
  126    BF200549Ta11P059G05P027G071F1_076.ab1    80 
  134  C BF200549Ta11P059G05P027G071R1_076.ab1   357 
  214    BF200549Ta11P059G05P027G071F1_076.ab1   168 
  398  C BF200549Ta11P059G05P027G071R1_076.ab1    93 
  402    BF200549Ta11P059G05P027G071F1_076.ab1   356 
Contig length: old 536, new 536

Contig length: old 536, new 536
New start: 0