No. words: 1556; after pruning: 1502


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.9 (1,1:837)  704  0.28 0.00 0.00  BF200774Ld01P003F06P003F121F1_032.ab1       63   780 (0)  C BF200774Ld01P003F06P003F121R1_032.ab1   (0)   776    59 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  354 nodes

 179 str. conn. components

Path
    1    BF200774Ld01P003F06P003F121F1_032.ab1     1 
  257  C BF200774Ld01P003F06P003F121R1_032.ab1   582 
  261    BF200774Ld01P003F06P003F121F1_032.ab1   261 
  281  C BF200774Ld01P003F06P003F121R1_032.ab1   558 
  313    BF200774Ld01P003F06P003F121F1_032.ab1   313 
  325  C BF200774Ld01P003F06P003F121R1_032.ab1   514 
  361    BF200774Ld01P003F06P003F121F1_032.ab1   361 
  369  C BF200774Ld01P003F06P003F121R1_032.ab1   470 
  381    BF200774Ld01P003F06P003F121F1_032.ab1   381 
  401  C BF200774Ld01P003F06P003F121R1_032.ab1   438 
Contig length: old 838, new 838

Contig length: old 838, new 838
New start: 0