No. words: 1602; after pruning: 1562


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.5 (1,1:846)  740  0.26 0.00 0.00  BF200774Ld03P003F06P003F121F1_028.ab1       42   796 (0)  C BF200774Ld03P003F06P003F121R1_028.ab1   (0)   806    52 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  374 nodes

 189 str. conn. components

Path
    1    BF200774Ld03P003F06P003F121F1_028.ab1     1 
  269  C BF200774Ld03P003F06P003F121R1_028.ab1   579 
  273    BF200774Ld03P003F06P003F121F1_028.ab1   273 
  285  C BF200774Ld03P003F06P003F121R1_028.ab1   563 
  301    BF200774Ld03P003F06P003F121F1_028.ab1   301 
  325  C BF200774Ld03P003F06P003F121R1_028.ab1   523 
  337    BF200774Ld03P003F06P003F121F1_028.ab1   337 
  345  C BF200774Ld03P003F06P003F121R1_028.ab1   503 
  357    BF200774Ld03P003F06P003F121F1_028.ab1   357 
  365  C BF200774Ld03P003F06P003F121R1_028.ab1   483 
  377    BF200774Ld03P003F06P003F121F1_028.ab1   377 
  397  C BF200774Ld03P003F06P003F121R1_028.ab1   451 
  457    BF200774Ld03P003F06P003F121F1_028.ab1   457 
  477  C BF200774Ld03P003F06P003F121R1_028.ab1   371 
Contig length: old 847, new 847

Contig length: old 847, new 847
New start: 0