No. words: 1503; after pruning: 1463


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 13.9 (1,1:849)  637  0.15 0.00 0.00  BF200774Ld09P003F06P003F121F1_047.ab1      136   785 (3)  C BF200774Ld09P003F06P003F121R1_047.ab1   (0)   715    66 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1    BF200774Ld09P003F06P003F121F1_047.ab1     1 
  327  C BF200774Ld09P003F06P003F121R1_047.ab1   524 
  335    BF200774Ld09P003F06P003F121F1_047.ab1   335 
  351  C BF200774Ld09P003F06P003F121R1_047.ab1   500 
  363    BF200774Ld09P003F06P003F121F1_047.ab1   363 
  371  C BF200774Ld09P003F06P003F121R1_047.ab1   480 
  383    BF200774Ld09P003F06P003F121F1_047.ab1   383 
  411  C BF200774Ld09P003F06P003F121R1_047.ab1   440 
Contig length: old 850, new 850

Contig length: old 850, new 850
New start: 0