No. words: 1569; after pruning: 1529


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.0 (1,1:835)  714  0.41 0.00 0.00  BF200774Ld11P003F06P003F121F1_043.ab1       47   779 (0)  C BF200774Ld11P003F06P003F121R1_043.ab1   (0)   790    58 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  362 nodes

 183 str. conn. components

Path
    1    BF200774Ld11P003F06P003F121F1_043.ab1     1 
  290  C BF200774Ld11P003F06P003F121R1_043.ab1   547 
  298    BF200774Ld11P003F06P003F121F1_043.ab1   298 
  322  C BF200774Ld11P003F06P003F121R1_043.ab1   515 
  362    BF200774Ld11P003F06P003F121F1_043.ab1   362 
  366  C BF200774Ld11P003F06P003F121R1_043.ab1   471 
  382    BF200774Ld11P003F06P003F121F1_043.ab1   382 
  390  C BF200774Ld11P003F06P003F121R1_043.ab1   447 
  426    BF200774Ld11P003F06P003F121F1_043.ab1   426 
  494  C BF200774Ld11P003F06P003F121R1_043.ab1   343 
  755    BF200774Ld11P003F06P003F121F1_043.ab1   755 
  766  C BF200774Ld11P003F06P003F121R1_043.ab1    71 
Contig length: old 836, new 836

Contig length: old 836, new 836
New start: 0