No. words: 1710; after pruning: 1684


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.1 (1,1:1162)  528  0.00 0.00 0.00  BF200942Ta20P034D07P003F101F1_073.ab1      289   835 (0)  C BF200942Ta20P034D07P003F101R1_073.ab1   (0)   875   329 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  276 nodes

 140 str. conn. components

Path
    1    BF200942Ta20P034D07P003F101F1_073.ab1     1 
  520  C BF200942Ta20P034D07P003F101R1_073.ab1   644 
  544    BF200942Ta20P034D07P003F101F1_073.ab1   544 
  548  C BF200942Ta20P034D07P003F101R1_073.ab1   616 
Contig length: old 1163, new 1163

Contig length: old 1163, new 1163
New start: 0