No. words: 1834; after pruning: 1766


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 19.4 (1,1:937)  846  0.34 0.00 0.00  BF201705Tu01P027B02P027B081F1_049.ab1       65   938 (22)  C BF201705Tu01P027B02P027B081R1_049.ab1   (0)   874     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  430 nodes

 217 str. conn. components

Path
    1    BF201705Tu01P027B02P027B081F1_049.ab1     1 
  501  C BF201705Tu01P027B02P027B081R1_049.ab1   438 
  932    BF201705Tu01P027B02P027B081F1_049.ab1   932 
Contig length: old 960, new 960

Contig length: old 960, new 960
New start: 0