No. words: 1934; after pruning: 1894


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 19.5 (1,1:940)  906  0.11 0.21 0.00  BF201705Tu02P027B02P027B081F1_064.ab1        1   939 (23)  C BF201705Tu02P027B02P027B081R1_064.ab1   (30)   942     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  464 nodes

 234 str. conn. components

Path
    1  C BF201705Tu02P027B02P027B081R1_064.ab1   972 
   34    BF201705Tu02P027B02P027B081F1_064.ab1     4 
  686  C BF201705Tu02P027B02P027B081R1_064.ab1   286 
  964    BF201705Tu02P027B02P027B081F1_064.ab1   933 
Contig length: old 993, new 993

Contig length: old 993, new 994
New start: 0 
I Change at: 70; seg lengths: entry 1, contig 0