No. words: 1252; after pruning: 1226


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     6

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 9.6 (1,1:472)  441  1.27 0.00 0.00  BF202635Ld05P078H04P078H101F1_084.ab1        1   471 (148)  C BF202635Ld05P078H04P078H101R1_084.ab1   (160)   473     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  226 nodes

 115 str. conn. components

Path
    1  C BF202635Ld05P078H04P078H101R1_084.ab1   633 
  188    BF202635Ld05P078H04P078H101F1_084.ab1    28 
  196  C BF202635Ld05P078H04P078H101R1_084.ab1   438 
  204    BF202635Ld05P078H04P078H101F1_084.ab1    44 
  228  C BF202635Ld05P078H04P078H101R1_084.ab1   406 
  232    BF202635Ld05P078H04P078H101F1_084.ab1    72 
  244  C BF202635Ld05P078H04P078H101R1_084.ab1   390 
  256    BF202635Ld05P078H04P078H101F1_084.ab1    96 
  296  C BF202635Ld05P078H04P078H101R1_084.ab1   338 
  304    BF202635Ld05P078H04P078H101F1_084.ab1   144 
Contig length: old 779, new 779

Contig length: old 779, new 779
New start: 0