No. words: 1352; after pruning: 1326


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 13.0 (1,1:747)  581  0.00 0.17 0.00  BF202765As02P078A05P078A111F1_052.ab1       75   676 (0)  C BF202765As02P078A05P078A111R1_052.ab1   (1)   675    73 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  298 nodes

 151 str. conn. components

Path
    1    BF202765As02P078A05P078A111F1_052.ab1     1 
  194  C BF202765As02P078A05P078A111R1_052.ab1   556 
  210    BF202765As02P078A05P078A111F1_052.ab1   210 
  298  C BF202765As02P078A05P078A111R1_052.ab1   452 
  302    BF202765As02P078A05P078A111F1_052.ab1   302 
  322  C BF202765As02P078A05P078A111R1_052.ab1   428 
  338    BF202765As02P078A05P078A111F1_052.ab1   338 
  346  C BF202765As02P078A05P078A111R1_052.ab1   404 
  358    BF202765As02P078A05P078A111F1_052.ab1   358 
  366  C BF202765As02P078A05P078A111R1_052.ab1   384 
  374    BF202765As02P078A05P078A111F1_052.ab1   374 
  386  C BF202765As02P078A05P078A111R1_052.ab1   364 
  406    BF202765As02P078A05P078A111F1_052.ab1   406 
  414  C BF202765As02P078A05P078A111R1_052.ab1   336 
Contig length: old 748, new 749

Contig length: old 749, new 749
New start: 0