No. words: 1283; after pruning: 1257


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:698)  554  0.00 0.17 0.34  BF202765Ld01P078A05P078A111F1_005.ab1       19   603 (0)  C BF202765Ld01P078A05P078A111R1_005.ab1   (0)   680    97 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1    BF202765Ld01P078A05P078A111F1_005.ab1     1 
  372  C BF202765Ld01P078A05P078A111R1_005.ab1   328 
Contig length: old 699, new 699

Contig length: old 699, new 699
New start: 0