No. words: 1238; after pruning: 1212


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.2 (1,1:460)  436  0.00 0.00 0.43  BF203070Ld02P027C02P027C081F1_013.ab1        1   462 (134)  C BF203070Ld02P027C02P027C081R1_013.ab1   (182)   460     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  226 nodes

 115 str. conn. components

Path
    1  C BF203070Ld02P027C02P027C081R1_013.ab1   642 
  450    BF203070Ld02P027C02P027C081F1_013.ab1   268 
  550  C BF203070Ld02P027C02P027C081R1_013.ab1    93 
  562    BF203070Ld02P027C02P027C081F1_013.ab1   380 
  566  C BF203070Ld02P027C02P027C081R1_013.ab1    77 
  570    BF203070Ld02P027C02P027C081F1_013.ab1   388 
Contig length: old 777, new 778

Contig length: old 778, new 778
New start: 0