No. words: 1381; after pruning: 1355


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.5 (1,1:517)  498  0.00 0.00 0.19  BF203070Ld07P027C02P027C081F1_003.ab1        1   518 (152)  C BF203070Ld07P027C02P027C081R1_003.ab1   (194)   517     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  256 nodes

 130 str. conn. components

Path
    1  C BF203070Ld07P027C02P027C081R1_003.ab1   711 
  354    BF203070Ld07P027C02P027C081F1_003.ab1   160 
  490  C BF203070Ld07P027C02P027C081R1_003.ab1   222 
  498    BF203070Ld07P027C02P027C081F1_003.ab1   304 
  526  C BF203070Ld07P027C02P027C081R1_003.ab1   186 
  530    BF203070Ld07P027C02P027C081F1_003.ab1   336 
  538  C BF203070Ld07P027C02P027C081R1_003.ab1   174 
  542    BF203070Ld07P027C02P027C081F1_003.ab1   348 
Contig length: old 863, new 864

Contig length: old 864, new 864
New start: 0