No. words: 1006; after pruning: 980


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 9.4 (1,1:455)  436  0.00 0.00 0.00  BF203070Tu01P027C02P027C081F1_054.ab1        4   456 (46)  C BF203070Tu01P027C02P027C081R1_054.ab1   (51)   453     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C BF203070Tu01P027C02P027C081R1_054.ab1   504 
  315    BF203070Tu01P027C02P027C081F1_054.ab1   267 
Contig length: old 550, new 550

Contig length: old 550, new 550
New start: 0