No. words: 881; after pruning: 855


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 0.4 (1,1:464)  273  5.76 0.29 0.00  BF291720Sn25P108C06P081A071F1_065.ab1        1   347 (1)  C BF291720Sn25P108C06P081A071R1_065.ab1   (68)   465   118 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  130 nodes

 67 str. conn. components

Path
    1  C BF291720Sn25P108C06P081A071R1_065.ab1   533 
Contig length: old 533, new 533

Contig length: old 533, new 533
New start: 0