No. words: 2314; after pruning: 2248


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      4

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.3 (1,1:15)  682  0.28 0.00 0.00  BF291928Ta12P108D06P081C071R1_070.ab1       16   720 (16)    BF291928Ta12P108D06P081C071R1_038.ab1        1   705 (0) *

Pass: 3
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    
Merge:(0)    0    0.0 2.0 (1,1:21)   87  0.00 0.00 1.03  BF291928Ta12P108D06P081C071F1_070.ab1       21   117 (0)    BF291928Ta12P108D06P081C071F1_038.ab1        1    96 (660) *

Pass: 4
#reads  #contigs (not counting singlets)
    2      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    2    2

Chimera merges: 


Contig 2:  346 nodes

 175 str. conn. components

Path
    1    BF291928Ta12P108D06P081C071R1_070.ab1     1 
   19    BF291928Ta12P108D06P081C071R1_038.ab1     4 
   23    BF291928Ta12P108D06P081C071R1_070.ab1    23 
   39    BF291928Ta12P108D06P081C071R1_038.ab1    24 
   43    BF291928Ta12P108D06P081C071R1_070.ab1    43 
   51    BF291928Ta12P108D06P081C071R1_038.ab1    36 
   63    BF291928Ta12P108D06P081C071R1_070.ab1    63 
   67    BF291928Ta12P108D06P081C071R1_038.ab1    52 
   71    BF291928Ta12P108D06P081C071R1_070.ab1    71 
   75    BF291928Ta12P108D06P081C071R1_038.ab1    60 
   87    BF291928Ta12P108D06P081C071R1_070.ab1    87 
   91    BF291928Ta12P108D06P081C071R1_038.ab1    76 
   95    BF291928Ta12P108D06P081C071R1_070.ab1    95 
   99    BF291928Ta12P108D06P081C071R1_038.ab1    84 
  115    BF291928Ta12P108D06P081C071R1_070.ab1   115 
  151    BF291928Ta12P108D06P081C071R1_038.ab1   136 
  179    BF291928Ta12P108D06P081C071R1_070.ab1   179 
  203    BF291928Ta12P108D06P081C071R1_038.ab1   188 
  710    BF291928Ta12P108D06P081C071R1_070.ab1   710 
Contig length: old 736, new 736

Contig 1:  42 nodes

 23 str. conn. components

Path
    1    BF291928Ta12P108D06P081C071F1_070.ab1     1 
   24    BF291928Ta12P108D06P081C071F1_038.ab1     4 
Contig length: old 777, new 776

Contig length: old 736, new 736
New start: 0 

Contig length: old 776, new 776
New start: 0