No. words: 2586; after pruning: 2534


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    
Merge:(0)    0    0.0 11.0 (1,1:9)  501  0.94 0.00 0.00  BF291928Ta22P108D06P081C071R1_092.ab1       10   542 (0)    BF291928Ta22P108D06P081C071R1_060.ab1        1   533 (172) *

Pass: 1
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    1    2
    2    1

Chimera merges: 


Contig 3:  258 nodes

 131 str. conn. components

Path
    1    BF291928Ta22P108D06P081C071R1_092.ab1     1 
   78    BF291928Ta22P108D06P081C071R1_060.ab1    69 
   82    BF291928Ta22P108D06P081C071R1_092.ab1    82 
  102    BF291928Ta22P108D06P081C071R1_060.ab1    93 
  106    BF291928Ta22P108D06P081C071R1_092.ab1   106 
  198    BF291928Ta22P108D06P081C071R1_060.ab1   189 
  202    BF291928Ta22P108D06P081C071R1_092.ab1   202 
  206    BF291928Ta22P108D06P081C071R1_060.ab1   197 
  226    BF291928Ta22P108D06P081C071R1_092.ab1   226 
  238    BF291928Ta22P108D06P081C071R1_060.ab1   229 
Contig length: old 714, new 714

Contig 2:  2 nodes

 2 str. conn. components

Path
    1    BF291928Ta22P108D06P081C071F1_060.ab1     1 
Contig length: old 783, new 783

Contig 1:  2 nodes

 2 str. conn. components

Path
    1    BF291928Ta22P108D06P081C071F1_092.ab1     1 
Contig length: old 556, new 556

Contig length: old 714, new 714
New start: 0