No. words: 1319; after pruning: 1293


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 12.5 (1,1:615)  581  0.65 0.00 0.16  BF292596Sn32P108A07P081D071F1_038.ab1        1   613 (43)  C BF292596Sn32P108A07P081D071R1_038.ab1   (48)   615     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1  C BF292596Sn32P108A07P081D071R1_038.ab1   663 
  131    BF292596Sn32P108A07P081D071F1_038.ab1    83 
  139  C BF292596Sn32P108A07P081D071R1_038.ab1   525 
  147    BF292596Sn32P108A07P081D071F1_038.ab1    99 
  155  C BF292596Sn32P108A07P081D071R1_038.ab1   509 
  159    BF292596Sn32P108A07P081D071F1_038.ab1   111 
  179  C BF292596Sn32P108A07P081D071R1_038.ab1   485 
  183    BF292596Sn32P108A07P081D071F1_038.ab1   135 
  215  C BF292596Sn32P108A07P081D071R1_038.ab1   449 
  219    BF292596Sn32P108A07P081D071F1_038.ab1   171 
Contig length: old 703, new 704

Contig length: old 704, new 704
New start: 0