No. words: 909; after pruning: 883


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.1 (1,1:411)  399  0.00 0.24 0.24  BF293500Ta20P078C05P095E111F1_094.ab1        1   412 (40)  C BF293500Ta20P078C05P095E111R1_094.ab1   (45)   412     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  200 nodes

 102 str. conn. components

Path
    1  C BF293500Ta20P078C05P095E111R1_094.ab1   457 
  246    BF293500Ta20P078C05P095E111F1_094.ab1   200 
  350  C BF293500Ta20P078C05P095E111R1_094.ab1   108 
  358    BF293500Ta20P078C05P095E111F1_094.ab1   312 
Contig length: old 497, new 498

Contig length: old 498, new 498
New start: 0