No. words: 1850; after pruning: 1824


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.9 (1,1:1287)  524  0.36 0.18 0.00  BF429272Ta12P116B08P078F111F1_006.ab1      351   911 (0)  C BF429272Ta12P116B08P078F111R1_006.ab1   (0)   939   378 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  270 nodes

 137 str. conn. components

Path
    1    BF429272Ta12P116B08P078F111F1_006.ab1     1 
  580  C BF429272Ta12P116B08P078F111R1_006.ab1   710 
  588    BF429272Ta12P116B08P078F111F1_006.ab1   588 
  616  C BF429272Ta12P116B08P078F111R1_006.ab1   674 
Contig length: old 1288, new 1289

Contig length: old 1289, new 1289
New start: 0