No. words: 1038; after pruning: 999


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.9 (1,1:282)  261  1.43 0.36 0.00  BF473348Tu01P016G06G12F1_066.scf        1   280 (59)  C BF473348Tu01P016G06G12R1_066.ab1   (76)   284     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    1    1
    2    1

Chimera merges: 


Contig 1:  126 nodes

 65 str. conn. components

Path
    1  C BF473348Tu01P016G06G12R1_066.ab1   360 
   80    BF473348Tu01P016G06G12F1_066.scf     4 
  257  C BF473348Tu01P016G06G12R1_066.ab1   103 
  274    BF473348Tu01P016G06G12F1_066.scf   198 
  318  C BF473348Tu01P016G06G12R1_066.ab1    42 
  336    BF473348Tu01P016G06G12F1_066.scf   260 
Contig length: old 416, new 415

Contig length: old 415, new 415
New start: 0