No. words: 1645; after pruning: 1619


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.1 (1,1:957)  679  0.15 0.00 0.00  BF474023Sn28P088B09P095A121F1_083.ab1      102   788 (0)  C BF474023Sn28P088B09P095A121R1_083.ab1   (0)   857   171 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  342 nodes

 173 str. conn. components

Path
    1    BF474023Sn28P088B09P095A121F1_083.ab1     1 
  221  C BF474023Sn28P088B09P095A121R1_083.ab1   738 
  225    BF474023Sn28P088B09P095A121F1_083.ab1   225 
  269  C BF474023Sn28P088B09P095A121R1_083.ab1   690 
  273    BF474023Sn28P088B09P095A121F1_083.ab1   273 
  281  C BF474023Sn28P088B09P095A121R1_083.ab1   678 
  285    BF474023Sn28P088B09P095A121F1_083.ab1   285 
  293  C BF474023Sn28P088B09P095A121R1_083.ab1   666 
  297    BF474023Sn28P088B09P095A121F1_083.ab1   297 
  305  C BF474023Sn28P088B09P095A121R1_083.ab1   654 
  313    BF474023Sn28P088B09P095A121F1_083.ab1   313 
  329  C BF474023Sn28P088B09P095A121R1_083.ab1   630 
  337    BF474023Sn28P088B09P095A121F1_083.ab1   337 
  345  C BF474023Sn28P088B09P095A121R1_083.ab1   614 
  377    BF474023Sn28P088B09P095A121F1_083.ab1   377 
  381  C BF474023Sn28P088B09P095A121R1_083.ab1   578 
  397    BF474023Sn28P088B09P095A121F1_083.ab1   397 
  405  C BF474023Sn28P088B09P095A121R1_083.ab1   554 
  425    BF474023Sn28P088B09P095A121F1_083.ab1   425 
  429  C BF474023Sn28P088B09P095A121R1_083.ab1   530 
Contig length: old 958, new 958

Contig length: old 958, new 958
New start: 0