No. words: 1449; after pruning: 1423


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.3 (1,1:562)  549  0.00 0.00 0.35  BF474092Ld10P067B05P067B111F1_088.ab1        1   564 (168)  C BF474092Ld10P067B05P067B111R1_088.ab1   (155)   562     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1  C BF474092Ld10P067B05P067B111R1_088.ab1   717 
  203    BF474092Ld10P067B05P067B111F1_088.ab1    48 
  295  C BF474092Ld10P067B05P067B111R1_088.ab1   423 
  315    BF474092Ld10P067B05P067B111F1_088.ab1   160 
  375  C BF474092Ld10P067B05P067B111R1_088.ab1   343 
  439    BF474092Ld10P067B05P067B111F1_088.ab1   284 
  555  C BF474092Ld10P067B05P067B111R1_088.ab1   163 
  575    BF474092Ld10P067B05P067B111F1_088.ab1   420 
  583  C BF474092Ld10P067B05P067B111R1_088.ab1   135 
  595    BF474092Ld10P067B05P067B111F1_088.ab1   440 
  603  C BF474092Ld10P067B05P067B111R1_088.ab1   115 
  611    BF474092Ld10P067B05P067B111F1_088.ab1   456 
  615  C BF474092Ld10P067B05P067B111R1_088.ab1   103 
  619    BF474092Ld10P067B05P067B111F1_088.ab1   464 
Contig length: old 886, new 887

Contig length: old 887, new 887
New start: 0