No. words: 1046; after pruning: 1020


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 9.5 (1,1:480)  462  0.00 0.00 0.42  BF474092Sn25P067B05P116C091F1_087.ab1        5   482 (38)  C BF474092Sn25P067B05P116C091R1_087.ab1   (50)   476     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BF474092Sn25P067B05P116C091R1_087.ab1   526 
   86    BF474092Sn25P067B05P116C091F1_087.ab1    40 
   94  C BF474092Sn25P067B05P116C091R1_087.ab1   433 
  206    BF474092Sn25P067B05P116C091F1_087.ab1   160 
  342  C BF474092Sn25P067B05P116C091R1_087.ab1   185 
  406    BF474092Sn25P067B05P116C091F1_087.ab1   360 
Contig length: old 565, new 566

Contig length: old 566, new 566
New start: 0