No. words: 1199; after pruning: 1173


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.9 (1,1:450)  444  0.00 0.22 0.00  BF474720Ld03P003D04D10F1_027.ab1        1   451 (165)  C BF474720Ld03P003D04D10R1_027.ab1   (131)   452     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1  C BF474720Ld03P003D04D10R1_027.ab1   583 
  244    BF474720Ld03P003D04D10F1_027.ab1   112 
  248  C BF474720Ld03P003D04D10R1_027.ab1   336 
  252    BF474720Ld03P003D04D10F1_027.ab1   120 
  256  C BF474720Ld03P003D04D10R1_027.ab1   328 
  284    BF474720Ld03P003D04D10F1_027.ab1   152 
  292  C BF474720Ld03P003D04D10R1_027.ab1   292 
  308    BF474720Ld03P003D04D10F1_027.ab1   176 
  312  C BF474720Ld03P003D04D10R1_027.ab1   272 
  328    BF474720Ld03P003D04D10F1_027.ab1   196 
  332  C BF474720Ld03P003D04D10R1_027.ab1   252 
  340    BF474720Ld03P003D04D10F1_027.ab1   208 
  368  C BF474720Ld03P003D04D10R1_027.ab1   216 
  412    BF474720Ld03P003D04D10F1_027.ab1   280 
  420  C BF474720Ld03P003D04D10R1_027.ab1   164 
  440    BF474720Ld03P003D04D10F1_027.ab1   308 
  444  C BF474720Ld03P003D04D10R1_027.ab1   140 
  448    BF474720Ld03P003D04D10F1_027.ab1   316 
  452  C BF474720Ld03P003D04D10R1_027.ab1   132 
  460    BF474720Ld03P003D04D10F1_027.ab1   328 
  468  C BF474720Ld03P003D04D10R1_027.ab1   116 
  484    BF474720Ld03P003D04D10F1_027.ab1   352 
  488  C BF474720Ld03P003D04D10R1_027.ab1    96 
  492    BF474720Ld03P003D04D10F1_027.ab1   360 
  508  C BF474720Ld03P003D04D10R1_027.ab1    76 
  512    BF474720Ld03P003D04D10F1_027.ab1   380 
  520  C BF474720Ld03P003D04D10R1_027.ab1    64 
  572    BF474720Ld03P003D04D10F1_027.ab1   440 
Contig length: old 748, new 748

Contig length: old 748, new 748
New start: 0