No. words: 856; after pruning: 830


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.8 (1,1:263)  252  0.00 0.00 0.00  BF474778Ld06P027G02P027G081F1_026.ab1        1   264 (152)  C BF474778Ld06P027G02P027G081R1_026.ab1   (176)   264     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  122 nodes

 63 str. conn. components

Path
    1  C BF474778Ld06P027G02P027G081R1_026.ab1   440 
  218    BF474778Ld06P027G02P027G081F1_026.ab1    42 
  226  C BF474778Ld06P027G02P027G081R1_026.ab1   215 
  242    BF474778Ld06P027G02P027G081F1_026.ab1    66 
  246  C BF474778Ld06P027G02P027G081R1_026.ab1   195 
  262    BF474778Ld06P027G02P027G081F1_026.ab1    86 
  274  C BF474778Ld06P027G02P027G081R1_026.ab1   167 
  282    BF474778Ld06P027G02P027G081F1_026.ab1   106 
  286  C BF474778Ld06P027G02P027G081R1_026.ab1   155 
  294    BF474778Ld06P027G02P027G081F1_026.ab1   118 
Contig length: old 592, new 592

Contig length: old 592, new 592
New start: 0