No. words: 1156; after pruning: 1130


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 6.9 (1,1:414)  396  0.49 0.00 0.00  BF482462Ld03P078C06P078C121F1_051.ab1        5   415 (150)  C BF482462Ld03P078C06P078C121R1_051.ab1   (180)   411     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  200 nodes

 102 str. conn. components

Path
    1  C BF482462Ld03P078C06P078C121R1_051.ab1   591 
  404    BF482462Ld03P078C06P078C121F1_051.ab1   228 
Contig length: old 741, new 741

Contig length: old 741, new 741
New start: 0