No. words: 1406; after pruning: 1366


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 9.0 (1,1:518)  488  1.74 0.00 0.00  BF482977Ta18P088F09P095B121F1_064.ab1        2   519 (185)  C BF482977Ta18P088F09P095B121R1_064.ab1   (184)   518     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C BF482977Ta18P088F09P095B121R1_064.ab1   702 
  336    BF482977Ta18P088F09P095B121F1_064.ab1   153 
  344  C BF482977Ta18P088F09P095B121R1_064.ab1   359 
  356    BF482977Ta18P088F09P095B121F1_064.ab1   173 
  428  C BF482977Ta18P088F09P095B121R1_064.ab1   275 
  568    BF482977Ta18P088F09P095B121F1_064.ab1   385 
Contig length: old 887, new 887

Contig length: old 887, new 887
New start: 0 
S Change at: 72; seg lengths: entry 1, contig 1