No. words: 1672; after pruning: 1646


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.3 (1,1:787)  760  0.13 0.13 0.00  BF483498Sn25P108G08P081F071F1_066.ab1        1   788 (43)  C BF483498Sn25P108G08P081F071R1_066.ab1   (52)   789     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  390 nodes

 197 str. conn. components

Path
    1  C BF483498Sn25P108G08P081F071R1_066.ab1   841 
   71    BF483498Sn25P108G08P081F071F1_066.ab1    18 
  597  C BF483498Sn25P108G08P081F071R1_066.ab1   245 
  809    BF483498Sn25P108G08P081F071F1_066.ab1   756 
  813  C BF483498Sn25P108G08P081F071R1_066.ab1    29 
  837    BF483498Sn25P108G08P081F071F1_066.ab1   784 
Contig length: old 884, new 884

Contig length: old 884, new 884
New start: 0