No. words: 1064; after pruning: 1038


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 6.2 (1,1:364)  355  0.28 0.00 0.00  BF484268Ld02P027F03P027F091F1_049.ab1        5   364 (175)  C BF484268Ld02P027F03P027F091R1_049.ab1   (164)   361     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  178 nodes

 91 str. conn. components

Path
    1  C BF484268Ld02P027F03P027F091R1_049.ab1   525 
  218    BF484268Ld02P027F03P027F091F1_049.ab1    58 
  258  C BF484268Ld02P027F03P027F091R1_049.ab1   268 
  266    BF484268Ld02P027F03P027F091F1_049.ab1   106 
  270  C BF484268Ld02P027F03P027F091R1_049.ab1   256 
  286    BF484268Ld02P027F03P027F091F1_049.ab1   126 
  318  C BF484268Ld02P027F03P027F091R1_049.ab1   208 
  330    BF484268Ld02P027F03P027F091F1_049.ab1   170 
Contig length: old 699, new 699

Contig length: old 699, new 699
New start: 0