No. words: 1058; after pruning: 1032


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.1 (1,1:368)  362  0.00 0.27 0.00  BF484268Ld03P027F03P027F091F1_064.ab1        1   369 (170)  C BF484268Ld03P027F03P027F091R1_064.ab1   (149)   370     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  184 nodes

 94 str. conn. components

Path
    1  C BF484268Ld03P027F03P027F091R1_064.ab1   519 
  304    BF484268Ld03P027F03P027F091F1_064.ab1   154 
  484  C BF484268Ld03P027F03P027F091R1_064.ab1    36 
  488    BF484268Ld03P027F03P027F091F1_064.ab1   338 
Contig length: old 689, new 689

Contig length: old 689, new 689
New start: 0