No. words: 1115; after pruning: 1089


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.3 (1,1:1003)  108  0.90 0.00 0.00  BG262734At02P067A06P067A121F1_077.ab1      423   533 (0)  C BG262734At02P067A06P067A121R1_077.ab1   (0)   582   472 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  52 nodes

 28 str. conn. components

Path
    1    BG262734At02P067A06P067A121F1_077.ab1     1 
  482  C BG262734At02P067A06P067A121R1_077.ab1   523 
  486    BG262734At02P067A06P067A121F1_077.ab1   486 
  490  C BG262734At02P067A06P067A121R1_077.ab1   515 
Contig length: old 1004, new 1004

Contig length: old 1004, new 1004
New start: 0